Package: SuperExactTest 1.1.2
Minghui Wang
SuperExactTest: Exact Test and Visualization of Multi-Set Intersections
Identification of sets of objects with shared features is a common operation in all disciplines. Analysis of intersections among multiple sets is fundamental for in-depth understanding of their complex relationships. This package implements a theoretical framework for efficient computation of statistical distributions of multi-set intersections based upon combinatorial theory, and provides multiple scalable techniques for visualizing the intersection statistics. The statistical algorithm behind this package was published in Wang et al. (2015) <doi:10.1038/srep16923>.
Authors:
SuperExactTest_1.1.2.tar.gz
SuperExactTest_1.1.2.zip(r-4.5)SuperExactTest_1.1.2.zip(r-4.4)SuperExactTest_1.1.2.zip(r-4.3)
SuperExactTest_1.1.2.tgz(r-4.4-x86_64)SuperExactTest_1.1.2.tgz(r-4.4-arm64)SuperExactTest_1.1.2.tgz(r-4.3-x86_64)SuperExactTest_1.1.2.tgz(r-4.3-arm64)
SuperExactTest_1.1.2.tar.gz(r-4.5-noble)SuperExactTest_1.1.2.tar.gz(r-4.4-noble)
SuperExactTest_1.1.2.tgz(r-4.4-emscripten)SuperExactTest_1.1.2.tgz(r-4.3-emscripten)
SuperExactTest.pdf |SuperExactTest.html✨
SuperExactTest/json (API)
# Install 'SuperExactTest' in R: |
install.packages('SuperExactTest', repos = c('https://mw201608.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/mw201608/superexacttest/issues
intersectionsetstatisticsvisualization
Last updated 11 months agofrom:1ab3488e38. Checks:OK: 4 NOTE: 5. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 04 2024 |
R-4.5-win-x86_64 | NOTE | Nov 04 2024 |
R-4.5-linux-x86_64 | NOTE | Nov 04 2024 |
R-4.4-win-x86_64 | NOTE | Nov 04 2024 |
R-4.4-mac-x86_64 | NOTE | Nov 04 2024 |
R-4.4-mac-aarch64 | NOTE | Nov 04 2024 |
R-4.3-win-x86_64 | OK | Nov 04 2024 |
R-4.3-mac-x86_64 | OK | Nov 04 2024 |
R-4.3-mac-aarch64 | OK | Nov 04 2024 |
Exports:cpsetsdeBarcodedpsetsintersectintersectElementsjaccardMSETplot.msetssupertestunion
Dependencies:
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Cancer Census Dataset | Cancer |
cis-eQTLs | cis.eqtls |
Multi-Set Intersection Probability | cpsets dpsets |
Decrypt Barcode | deBarcode |
GAWS Catalog Dataset | GWAS |
Set Operations | intersect union |
Find Intersection Membership | intersectElements |
Calculate Jaccard Index | jaccard |
Exact Test of Multi-Set Intersection | MSET |
Class to Contain Multi-Set Intersections | msets |
Draw Multi-Set Intersections | plot.msets |
Summarize an msets Object | summary.msets |
SuperExactTest Package | SuperExactTest |
Calculate Intersections Among Multiple Sets and Perform Statistical Tests | supertest supertest,list-method |